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111 lines
5.7 KiB
111 lines
5.7 KiB
Command:
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Rscript compare_gcat_outputs.R ./GCAT2/Inoculation.txt ./GCAT3/Inoculation.txt Inoculation
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Summary:
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Mode TRUE NA's
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logical 96 0
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[1] TRUE TRUE TRUE TRUE TRUE TRUE
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GCAT2:
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row plate well media strain model spec.growth
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1 1 YPDAFEXglucoseTests_2-25-10 A01 None Empty <NA>: skipped NA
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2 2 YPDAFEXglucoseTests_2-25-10 B01 None Empty <NA>: skipped NA
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3 3 YPDAFEXglucoseTests_2-25-10 C01 None Empty <NA>: skipped NA
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4 4 YPDAFEXglucoseTests_2-25-10 D01 None Empty <NA>: skipped NA
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5 5 YPDAFEXglucoseTests_2-25-10 E01 None Empty <NA>: skipped NA
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6 6 YPDAFEXglucoseTests_2-25-10 F01 None Empty <NA>: skipped NA
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tot.growth lag.time inoc.OD good.fit empty asymp tank reach other
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1 NA NA NA NA E - - NA NA
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2 NA NA NA NA E - - NA NA
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3 NA NA NA NA E - - NA NA
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4 NA NA NA NA E - - NA NA
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5 NA NA NA NA E - - NA NA
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6 NA NA NA NA E - - NA NA
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pdf.file page.no
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1 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.35.pdf 2
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2 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.35.pdf 3
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3 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.35.pdf 4
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4 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.35.pdf 5
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5 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.35.pdf 6
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6 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.35.pdf 7
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Destination.plate.name Well.ID Plate.source Well.Source
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1 Control strain plate Empty Empty Empty
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2 Control strain plate Empty Empty Empty
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3 Control strain plate Empty Empty Empty
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4 Control strain plate Empty Empty Empty
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5 Control strain plate Empty Empty Empty
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6 Control strain plate Empty Empty Empty
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GCAT3:
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row plate well media strain model spec.growth
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1 1 YPDAFEXglucoseTests_2-25-10 A01 None Empty <NA>: skipped NA
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2 2 YPDAFEXglucoseTests_2-25-10 B01 None Empty <NA>: skipped NA
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3 3 YPDAFEXglucoseTests_2-25-10 C01 None Empty <NA>: skipped NA
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4 4 YPDAFEXglucoseTests_2-25-10 D01 None Empty <NA>: skipped NA
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5 5 YPDAFEXglucoseTests_2-25-10 E01 None Empty <NA>: skipped NA
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6 6 YPDAFEXglucoseTests_2-25-10 F01 None Empty <NA>: skipped NA
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tot.growth lag.time inoc.OD good.fit empty asymp tank reach other
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1 NA NA NA NA E - - NA NA
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2 NA NA NA NA E - - NA NA
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3 NA NA NA NA E - - NA NA
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4 NA NA NA NA E - - NA NA
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5 NA NA NA NA E - - NA NA
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6 NA NA NA NA E - - NA NA
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pdf.file page.no
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1 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.31.pdf 2
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2 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.31.pdf 3
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3 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.31.pdf 4
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4 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.31.pdf 5
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5 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.31.pdf 6
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6 YPDAFEXglucoseTests_2-25-10_plots_2013-11-26_11.54.31.pdf 7
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Destination.plate.name Well.ID Plate.source Well.Source Media.Definition
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1 Control strain plate Empty Empty Empty None
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2 Control strain plate Empty Empty Empty None
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3 Control strain plate Empty Empty Empty None
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4 Control strain plate Empty Empty Empty None
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5 Control strain plate Empty Empty Empty None
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6 Control strain plate Empty Empty Empty None
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Specific Growth Comparison Summary:
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Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
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1 1 1 1 1 1 49
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Total Growth Comparison Summary:
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Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
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1 1 1 1 1 1 49
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Lag Time Comparison Summary:
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Min. 1st Qu. Median Mean 3rd Qu. Max. NA's
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1 1 1 1 1 1 49
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null device
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1
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[1] row plate well
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[4] media strain model
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[7] spec.growth tot.growth lag.time
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[10] inoc.OD good.fit empty
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[13] asymp tank reach
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[16] other pdf.file page.no
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[19] Destination.plate.name Well.ID Plate.source
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[22] Well.Source
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<0 rows> (or 0-length row.names)
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[1] row plate well
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[4] media strain model
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[7] spec.growth tot.growth lag.time
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[10] inoc.OD good.fit empty
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[13] asymp tank reach
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[16] other pdf.file page.no
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[19] Destination.plate.name Well.ID Plate.source
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[22] Well.Source Media.Definition
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<0 rows> (or 0-length row.names)
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